A, overall structure of 12A11 fab with Aβ1–7 peptide. Heavy chain is shown in cyan, light chain in blue, and Aβ peptide in yellow. B, 12A11 with Aβ1–7 peptide. The surface of the heavy chain is shown in cyan and light chain in light blue. Aβ peptide is shown in stick representation with oxygens colored red, nitrogens in blue, and carbons in yellow. C, 12A11 with Aβ1–40 peptide. The 3.0 sigma electron density omit map (calculated while omitting the Aβ peptide from the model for phase calculations) is shown in yellow. Protein and peptide are shown in stick representation with oxygens colored red, nitrogens in blue, and carbons in yellow for the peptides, light blue for the light chain, and cyan for the heavy chain. D, 12A11 with Aβ1–40. Peptide in stick representation with oxygens colored red, nitrogens in blue, and carbons in yellow. Fab in surface representation colored white with the exception of CDRs contacting the peptide. CDR H1 is shown in red, H2 blue, H3 green, L1 magenta, and L3 cyan. Only CDRs contacting the peptide are shown.