CA074R mutations localize at or near the GP1-GP2 interface in the GP prefusion crystal structure. In all diagrams, GP1 is depicted in blue, GP2 in red, GP1 CA074R mutations in green, and GP2 CA074R mutations in yellow. (A) Linear representation of the amino acid sequence of GPΔMuc. S-S indicates the intersubunit disulfide bond between C53 and C609. sp, signal peptide; fl, fusion loop; hr1 and hr2, heptad repeats; tm, transmembrane domain; N, N terminus; C, C terminus. (B) Structure of GP in a prefusion conformation (39). Cartoon representation of a GP1-GP2 monomer is shown. Remaining subunits are shown as a surface-shaded watermark. The boxed inset contains the membrane-proximal base of the trimer, in which the CA074R mutations are located. The β13-β14 loop is modeled as a chain of blue circles. (C) Magnified view of the inset shown in panel B rotated by 90°. The side chains of D47, I584, K588, and their contacting residues are shown. Dashed pink lines connect atoms from different side chains separated by ≤3.9 Å. Other CA074R residues are not shown for clarity. (D) View shown in panel C rotated by 90°. (E) Schematic diagram of the potential interactions made by residues mutated in the CA074R viruses. Residues approaching ≤3.9 Å to each CA074R residue are shown. Beige arcs, hydrophobic interactions; dashed lines, potential ionic interactions. Visualizations of the GP structures shown in panels B to D (Protein Data Bank accession no. 3CSY) were rendered in Pymol (Delano Scientific).