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J Biol Chem. 2009 Dec 11;284(50):34911-7. doi: 10.1074/jbc.M109.062034. Epub 2009 Oct 19.

Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure.

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  • 1Biochemie Zentrum der Universität Heidelberg (BZH), Im Neuenheimer Feld 307, D-69120 Heidelberg, Germany.

Abstract

Nascent mRNAs produced by transcription in the nucleus are subsequently processed and packaged into mRNA ribonucleoprotein particles (messenger ribonucleoproteins (mRNPs)) before export to the cytoplasm. Here, we have used the poly(A)-binding protein Nab2 to isolate mRNPs from yeast under conditions that preserve mRNA integrity. Upon Nab2-tandem affinity purification, several mRNA export factors were co-enriched (Yra1, Mex67, THO-TREX) that were present in mRNPs of different size and mRNA length. High-throughput sequencing of the co-precipitated RNAs indicated that Nab2 is associated with the bulk of yeast transcripts with no specificity for different mRNA classes. Electron microscopy revealed that many of the mRNPs have a characteristic elongated structure. Our data suggest that mRNPs, although associated with different mRNAs, have a unifying core structure.

PMID:
19840948
[PubMed - indexed for MEDLINE]
PMCID:
PMC2787353
Free PMC Article

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