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Proc Natl Acad Sci U S A. 2009 Oct 20;106(42):17747-50. doi: 10.1073/pnas.0906390106. Epub 2009 Oct 6.

Structural imperatives impose diverse evolutionary constraints on helical membrane proteins.

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  • 1Department of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095, USA.

Abstract

The amino acid sequences of transmembrane regions of helical membrane proteins are highly constrained, diverging at slower rates than their extramembrane regions and than water-soluble proteins. Moreover, helical membrane proteins seem to fall into fewer families than water-soluble proteins. The reason for the differential restrictions on sequence remains unexplained. Here, we show that the evolution of transmembrane regions is slowed by a previously unrecognized structural constraint: Transmembrane regions bury more residues than extramembrane regions and soluble proteins. This fundamental feature of membrane protein structure is an important contributor to the differences in evolutionary rate and to an increased susceptibility of the transmembrane regions to disease-causing single-nucleotide polymorphisms.

PMID:
19815527
[PubMed - indexed for MEDLINE]
PMCID:
PMC2764890
Free PMC Article

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