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    Biol Direct. 2009 Oct 6;4:38.

    Strong association between pseudogenization mechanisms and gene sequence length.

    Khachane AN, Harrison PM.

    Department of Biology, McGill University, Stewart Biology Building, Montreal, QC, H3A 1B1, Canada. amit.khachane@mail.mcgill.ca

    Abstract

    Pseudogenes arise from the decay of gene copies following either RNA-mediated duplication (processed pseudogenes) or DNA-mediated duplication (nonprocessed pseudogenes). Here, we show that long protein-coding genes tend to produce more nonprocessed pseudogenes than short genes, whereas the opposite is true for processed pseudogenes. Protein-coding genes longer than 3000 bp are 6 times more likely to produce nonprocessed pseudogenes than processed ones. REVIEWERS: This article was reviewed by Dr. Dan Graur and Dr. Craig Nelson (nominated by Dr. J Peter Gogarten).

    PMID: 19807910 [PubMed - indexed for MEDLINE]PMCID: PMC2768697Free PMC Article

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