Algoriphagus olei sp. nov., isolated from oil-contaminated soil

Int J Syst Evol Microbiol. 2009 Nov;59(Pt 11):2909-15. doi: 10.1099/ijs.0.009415-0. Epub 2009 Jul 23.

Abstract

A motile, Gram-negative, pinkish red-pigmented bacterium (strain CC-Hsuan-617(T)) was isolated from an oil-contaminated soil near an oil refinery located in Kaohsiung County, Taiwan. 16S rRNA gene sequence analysis showed that strain CC-Hsuan-617(T) clustered with Algoriphagus mannitolivorans (97.5 % sequence similarity), Algoriphagus aquatilis (98.0 %) and Algoriphagus boritolerans (97.5 %), followed by Algoriphagus ornithinivorans (97.1 %) and Algoriphagus alkaliphilus (97.1 %). The fatty acid profile of the novel strain was slightly different from those reported for recognized Algoriphagus species. The quinone system contained menaquinone MK-7 as the predominant component. The major polar lipids were phosphatidylethanolamine, an unknown polar lipid, an unknown phospholipid and an unknown aminophospholipid. The main cell polyamine was sym-homospermidine; lesser amounts of spermine and spermidine were also found. The results of DNA-DNA hybridization, and physiological and biochemical tests allowed the genotypic and phenotypic differentiation of strain CC-Hsuan-617(T) from recognized Algoriphagus species. Strain CC-Hsuan-617(T) is thus considered to represent a novel species of the genus Algoriphagus, for which the name Algoriphagus olei sp. nov. is proposed. The type strain is CC-Hsuan-617(T) (=BCRC 17886(T)=CCUG 57471(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacteroidetes / classification
  • Bacteroidetes / genetics
  • Bacteroidetes / isolation & purification*
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / genetics
  • Environmental Pollution*
  • Molecular Sequence Data
  • Oils / analysis
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Soil / analysis
  • Soil Microbiology*
  • Soil Pollutants / analysis
  • Taiwan

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Oils
  • RNA, Ribosomal, 16S
  • Soil
  • Soil Pollutants

Associated data

  • GENBANK/FJ231215