Solubilized thylakoid membranes of Chlamydomonas wild type (CC425) were subjected to PAGE analyses. A (top lane), BN-PAGE of thylakoid membrane proteins stained with Coomassie Brilliant Blue. A (bottom lane), green native gel of the same sample. B, Two-dimensional gel electrophoresis of the wild type, where BN-PAGE was used in the first dimension (Dim.) and 12% acrylamide SDS-PAGE was used in the second dimension. The two-dimensional gel was visualized by silver staining. mA, Mitochondrial H+-ATP synthase; PII1 to PII3, PSII reaction center subunits (D1, D2, CP43, and CP47 proteins); PI, PSI complex (PsaA, PsaB, and PsaF) and LHCI protein; cA, chloroplast ATP synthase (CF0F1); Cb, cytochrome b6f; LT, LHCII trimer; LM, LHCII monomer.