Display Settings:

Format

Send to:

Choose Destination

    Biochemistry. 2009 Jun 23;48(24):5553-62.

    Structure, stability, and flexibility of ribosomal protein L14e from Sulfolobus solfataricus.

    Edmondson SP, Turri J, Smith K, Clark A, Shriver JW.

    Alabama High Field NMR Laboratory, Department of Chemistry, University of Alabama in Huntsville, Huntsville, Alabama 35899, USA.

    Ribosomal protein L14e is a component of the large ribosomal subunit in both archaea and eukaryotes. We report here a high-resolution NMR solution structure of recombinant L14e and show that the N-terminal 57 residues adopt a classic SH3 fold. The protein contains a tight turn between strands 1 and 2 instead of the typical SH3 RT-loop, indicating that it is unlikely to interact with neighboring ribosomal proteins using the common SH3 site for proline-rich sequences. The remainder of the protein (39 residues) forms a largely extended chain with a short helix which packs onto the surface of the SH3 domain via hydrophobic interactions. It has the potential of adopting an alternative structure to expose a hydrophobic surface for protein-protein interactions in the ribosome without disruption of the SH3 fold. (15)N relaxation data demonstrate that the majority of the C-terminal chain is well-defined on the SH3 surface. The globular protein unfolds reversibly with a T(m) of 102.8 degrees C at pH 7, making it one of the most stable SH3 domain proteins described to date. The structure of L14e is expected to serve as a model for other members of the L14e family, along with members of the COG2163 group, including L6e and L27e. Interestingly, the N-terminal sequence of L14e shows the greatest similarity of any Sulfolobus protein to the reported N-terminal sequence of Sac8b, a DNA-binding protein reported by Grote et al. ((1986) Biochim. Biophys. Acta 873, 405-413). The likelihood that L14e and Sac8b are the same protein is discussed.

    PMID: 19432457 [PubMed - indexed for MEDLINE]

    PMCID: 2703186

    Supplemental Content

    Click here to read Click here to read Click here to read Click here to read