Nucleic Acids Res. 2009 Jul;37(Web Server issue):W323-8. Epub 2009 May 6.

GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists.

Antonov AV, Dietmann S, Wong P, Lutter D, Mewes HW.

Source

Helmholtz Zentrum München - German Research Center for Environmental Health (GmbH), Institute for Bioinformatics and Systems Biology, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany. a.antonov@helmholtz-muenchen.de

Abstract

GeneSet2miRNA is the first web-based tool which is able to identify whether or not a gene list has a signature of miRNA-regulatory activity. As input, GeneSet2miRNA accepts a list of genes. As output, a list of miRNA-regulatory models is provided. A miRNA-regulatory model is a group of miRNAs (single, pair, triplet or quadruplet) that is predicted to regulate a significant subset of genes from the submitted list. GeneSet2miRNA provides a user friendly dialog-driven web page submission available for several model organisms. GeneSet2miRNA is freely available at http://mips.helmholtz-muenchen.de/proj/gene2mir/.

PMID:: 19420064; [PubMed - indexed for MEDLINE]
PMCID:: PMC2703952

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