Generation of Tgfb1flox-ex 6 mice. a: A Cre-LoxP based conditional gene targeting scheme depicting the relevant piece of Tgfb1 genomic locus, the Tgfb1flox-ex 6 targeting vector and the Tgfb1flox-ex 6 targeted and deleted locus. PCR primers and southern blot probes are indicated. E, EcoRV; St, StuI; A, ApaI; S, SacI; As, AscI; Sg, SgfI. b: Southern blot screening. StuI cuts both outside and inside and EcoRV cuts only outside at both ends of the targeting vector. AscI and SgfI are only present in the LoxP. Probe A is an outside side probe. Only two (clone #1 and #17) of the five originally targeted clones are shown. StuI, ApaI, and AscI/EcoRV blots confirm the presence of a targeted floxed (exon 6, neo) allele. Positive clones were identified by 3.0 kb (StuI blot), 8.9 kb (ApaI blot), and 10.1 kb (AscI/EcoRV blot). A positive targeted floxed (exon 6, neo) clone (#17) was treated with Cre recombinase and the floxed-neo was deleted in these ES cells. c: Long PCR shows the presence of an expected 8.9-kb band before the Cre-excision and a 7.8-kb band after the Cre-mediated excision in #17 clone, indicating a successful removal of floxed-neo from the targeted floxed (exon 6) allele in ES cells. d: ApaI blot confirms the presence of Tgfb1flox-ex 6 allele in germline chimera. Wild type (+/+) mice and targeted floxed (exon 6, neo) ES cells are used as controls. e: PCR genotyping of wild type, Tgfb1 floxed heterozygous (+/flox (exon 6)) and Tgfb1 floxed homozygous (flox-ex 6/flox-ex 6) mice. f: PCR amplification indicating partial but specific Cre-mediated excision in thymus of Tgfb1flox-ex 6/flox-ex 6/LckCre Tg mice. PCR primer p3 is a hybrid primer with sequences from both the Tgfb1 and LoxP and detects specifically Tgfb1flox-ex 6 allele but not the wild-type allele under conditions described in the Materials and Methods. There is no floxed deleted allele (1.23 kb) in control mice which is seen in Tgfb1flox-ex 6/flox-ex 6/LckCre Tg mice. Note that no deletion product(s) at the Tgfb1 locus in liver, heart, lung, colon and brain tissue of Tgfb1flox-ex 6/flox-ex 6/LckCre nTg or Tgfb1+/+/LckCre Tg mice was found (not shown), indicating that Cre-mediated excision occurred only in the thymus of Tgfb1flox-ex 6/flox-ex 6/LckCre Tg mice. g: Q-RT-PCR analysis showing significantly decreased Tgfb1 expression (*P = 3.5747e-3) in T cells from Tgfb1flox-ex 6/flox-ex 6/LckCre Tg mice as compared to the control non-transgenic mice. Each control value is normalized to 1.0.