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Genome Biol. 2009;10(5):R46. doi: 10.1186/gb-2009-10-5-r46. Epub 2009 May 1.

MotifAdjuster: a tool for computational reassessment of transcription factor binding site annotations.

Author information

  • 1Leibniz Institute of Plant Genetics and Crop Plant Research Gatersleben (IPK), Corrensstrasse 3, 06466 Gatersleben, Germany. Jens.Keilwagen@ipk-gatersleben.de

Abstract

Valuable binding-site annotation data are stored in databases. However, several types of errors can, and do, occur in the process of manually incorporating annotation data from the scientific literature into these databases. Here, we introduce MotifAdjuster http://dig.ipk-gatersleben.de/MotifAdjuster.html, a tool that helps to detect these errors, and we demonstrate its efficacy on public data sets.

PMID:
19409082
[PubMed - indexed for MEDLINE]
PMCID:
PMC2718512
Free PMC Article

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