Two site-directed mutations are required for the conversion of a sugar dehydratase into an aminotransferase

Biochemistry. 2009 Jun 16;48(23):5246-53. doi: 10.1021/bi9005545.

Abstract

L-colitose and d-perosamine are unusual sugars found in the O-antigens of some Gram-negative bacteria such as Escherichia coli, Vibrio cholerae, and Salmonella enterica, among others. The biosynthetic pathways for these two sugars begin with the formation of GDP-mannose from d-mannose 1-phosphate and GTP followed by the subsequent dehydration and oxidation of GDP-mannose to yield GDP-4-keto-6-deoxymannose. Following the production of GDP-4-keto-6-deoxymannose, the two pathways diverge. In the case of GDP-perosamine biosynthesis, the next step involves an amination reaction at the C-4' position of the sugar, whereas in GDP-colitose production, the 3'-hydroxyl group is removed. The enzymes catalyzing these reactions are GDP-perosamine synthase and GDP-4-keto-6-deoxymannose-3-dehydratase (ColD), respectively. Both of these enzymes are pyridoxal 5'-phosphate (PLP) dependent, and their three-dimensional structures place them into the well-characterized aspartate aminotransferase superfamily. A comparison of the active site architecture of ColD from E. coli (strain 5a, type O55:H7) to that of GDP-perosamine synthase from Caulobacter crescentus CB15 suggested that only two mutations would be required to convert ColD into an aminotransferase. Here we present a combined structural and functional analysis of the ColD S187N/H188K mutant protein that, indeed, has been converted from a sugar dehydratase into an aminotransferase.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism
  • Binding Sites
  • Carbohydrate Epimerases / chemistry
  • Carbohydrate Epimerases / metabolism
  • Caulobacter crescentus / enzymology
  • Caulobacter crescentus / metabolism
  • Crystallography, X-Ray
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism
  • Guanosine Diphosphate Mannose / analogs & derivatives
  • Guanosine Diphosphate Mannose / chemistry
  • Guanosine Diphosphate Mannose / metabolism
  • Hydro-Lyases / chemistry*
  • Hydro-Lyases / genetics
  • Hydro-Lyases / metabolism
  • Kinetics
  • Models, Molecular
  • Mutation*
  • Protein Conformation
  • Substrate Specificity
  • Transaminases / chemistry*
  • Transaminases / metabolism

Substances

  • Bacterial Proteins
  • Escherichia coli Proteins
  • GDP-4-keto-6-deoxymannose
  • Guanosine Diphosphate Mannose
  • Transaminases
  • GDP-4-keto-6-deoxymannose-3-dehydratase, E coli
  • Hydro-Lyases
  • Carbohydrate Epimerases
  • perosamine synthetase

Associated data

  • PDB/3GR9