Bioinformatics. 2009 May 1;25(9):1208-10. Epub 2009 Mar 3.

Illoura: a software tool for analysis, visualization and semantic querying of cellular and other spatial biological data.

McComb T, Cairncross O, Noske AB, Wood DL, Marsh BJ, Ragan MA.

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Institute for Molecular Bioscience, University of Queensland, Brisbane, Queensland 4072, Australia.

Abstract

New high-resolution approaches for mapping ultrastructure of cells in 3D are leading to unprecedented quantities of spatial data. Here we present Illoura, a software tool for the integrated management, analysis and visualization of these data within a semantic context, and illustrate its capability by analysis of spatial relationships in mammalian beta cells. AVAILABILITY: http://www.visiblecell.com/illoura. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

PMID:: 19258351; [PubMed - indexed for MEDLINE]
PMCID:: PMC2672631

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