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Bioinformatics. 2009 Apr 1;25(7):962-3. doi: 10.1093/bioinformatics/btp097. Epub 2009 Mar 2.

DIYA: a bacterial annotation pipeline for any genomics lab.

Author information

  • 1Genomics Department, Biological Defense Research Directorate, Naval Medical Research Center, Rockville, MD, USA.

Abstract

DIYA (Do-It-Yourself Annotator) is a modular and configurable open source pipeline software, written in Perl, used for the rapid annotation of bacterial genome sequences. The software is currently used to take DNA contigs as input, either in the form of complete genomes or the result of shotgun sequencing, and produce an annotated sequence in Genbank file format as output.

AVAILABILITY:

Distribution and source code are available at (https://sourceforge.net/projects/diyg/).

SUPPLEMENTARY INFORMATION:

Supplementary data are available at Bioinformatics online.

PMID:
19254921
[PubMed - indexed for MEDLINE]
PMCID:
PMC2660880
Free PMC Article
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