The crystal structure of C176A mutated [Fe]-hydrogenase suggests an acyl-iron ligation in the active site iron complex

FEBS Lett. 2009 Feb 4;583(3):585-90. doi: 10.1016/j.febslet.2009.01.017. Epub 2009 Jan 20.

Abstract

[Fe]-hydrogenase is one of three types of enzymes known to activate H(2). Crystal structure analysis recently revealed that its active site iron is ligated square-pyramidally by Cys176-sulfur, two CO, an "unknown" ligand and the sp(2)-hybridized nitrogen of a unique iron-guanylylpyridinol-cofactor. We report here on the structure of the C176A mutated enzyme crystallized in the presence of dithiothreitol (DTT). It suggests an iron center octahedrally coordinated by one DTT-sulfur and one DTT-oxygen, two CO, the 2-pyridinol's nitrogen and the 2-pyridinol's 6-formylmethyl group in an acyl-iron ligation. This result led to a re-interpretation of the iron ligation in the wild-type.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenine / metabolism
  • Catalytic Domain
  • Crystallography, X-Ray
  • Cytosine / metabolism
  • Holoenzymes / chemistry
  • Holoenzymes / genetics
  • Holoenzymes / metabolism
  • Hydrogenase / chemistry*
  • Hydrogenase / genetics
  • Hydrogenase / metabolism*
  • Iron / chemistry*
  • Iron / metabolism*
  • Iron-Sulfur Proteins / chemistry*
  • Iron-Sulfur Proteins / genetics
  • Iron-Sulfur Proteins / metabolism*
  • Methanococcales / enzymology
  • Methanococcales / genetics
  • Mutation / genetics
  • Protein Structure, Quaternary

Substances

  • Holoenzymes
  • Iron-Sulfur Proteins
  • Cytosine
  • Iron
  • iron hydrogenase
  • Hydrogenase
  • Adenine