The structure of d(CACACG).d(CGTGTG)

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Jan 1;65(Pt 1):8-13. doi: 10.1107/S1744309108037706. Epub 2008 Dec 25.

Abstract

The crystal structure of d(CACACG).d(CGTGTG) was solved to a resolution of 2.05 A in space group P2(1). The duplex assumes the left-handed Z-DNA structure. The presence of two A.T base pairs in the hexamer does not greatly affect the conformation. The most significant changes compared with the regular structure of Z-DNA are in the values of twist in the central portion of the helix. This variation, as well as others in the values of roll, inclination etc., follow the pattern observed previously in the structure of d(CGCACG).d(CGTGCG).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • DNA / chemistry
  • DNA, Z-Form / chemistry*
  • Genetic Variation
  • Molecular Conformation
  • Molecular Sequence Data
  • Molecular Structure
  • Nucleic Acid Conformation
  • Oligodeoxyribonucleotides / chemistry
  • Temperature
  • Water / chemistry

Substances

  • DNA, Z-Form
  • Oligodeoxyribonucleotides
  • Water
  • DNA