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PLoS One. 2009;4(1):e4200. doi: 10.1371/journal.pone.0004200. Epub 2009 Jan 15.

A genetic strategy for stochastic gene activation with regulated sparseness (STARS).

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  • 1Zilkha Neurogenetic Institute, University of Southern California, Los Angeles, California, United States of America.

Abstract

It remains a challenge to establish a straightforward genetic approach for controlling the probability of gene activation or knockout at a desired level. Here, we developed a method termed STARS: stochastic gene activation with genetically regulated sparseness. The stochastic expression was achieved by two cross-linked, mutually-exclusive Cre-mediated recombinations. The stochastic level was further controlled by regulating Cre/lox reaction kinetics through varying the intrachromosomal distance between the lox sites mediating one of the recombinations. In mammalian cell lines stably transfected with a single copy of different STARS transgenes, the activation/knockout of reporter genes was specifically controlled to occur in from 5% to 50% of the cell population. STARS can potentially provide a convenient way for genetic labeling as well as gene expression/knockout in a population of cells with a desired sparseness level.

PMID:
19145242
[PubMed - indexed for MEDLINE]
PMCID:
PMC2615212
Free PMC Article

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