(a) Starting HMM atomic model used for flexible fitting built using the predicted structure of the tarantula RLC (fig. 4), the structure of human S236 and the chicken smooth muscle HMM atomic model (without the S2)16. The kink (red spheres) in the S2 was located at Met-888, in agreement with Blankenfeldt et al. 200636 (see fig. 3b and 5c). The connected skeleton of 31 positional markers used for flexible fitting, located inside the density subset of the interacting-heads, is shown with gray spheres and rods. (b) Final HMM atomic model after the flexible fitting. The RLC of the blocked and free heads are shown in yellow and red, with their corresponding NTFs in tan (blocked) and pink (free). The ELC of the blocked and the free heads are shown in orange and purple. The heavy chain of the blocked and free head are shown in green and blue. The 3D-map is shown as a pale gray surface in (a) and (b). (c) A comparison of the crystal structure of the human S236 before (red α-helices) and after (blue and green α-helices) the flexible fitting, which only changed the position of the coil-coiled α-helices. The arrow head indicates that the position of the kink (Met-888) does not changed before and after the flexible fitting. C-terminus are Lys-974 and Leu-972 (top). N-terminus is Pro-849 (red spheres, bottom). The connection of the two α-helices of the S2 with the two α-helices of the interacting-heads regulatory domains was done between Ser-853 and Gln-852. The connection of the S2 N-terminal with the C-terminal structure of the heads required some unbending and torsion in the 6 (blocked head) or 8 (free head) intervening aa’s (see Results). (d) The nine interactions of the interacting-head motif in a relaxed thick filament, as viewed (towards) the filament surface (cf. 5a and b from above the filament surface). The five intramolecular interactions (a, d, e, f, g) are between: (a) the CM loop of the free head motor domain (blue) and the S2 of the interacting-head motif (blue); (d) the blocked head motor domain (green) and the free head motor domain16 (blue), (e) the blocked head motor domain (green) and the free head ELC16 (purple), (f) the blocked head motor domain (green) and the S2 of the interacting-head motif36 (blue and green), and (g) the blocked head ELC (orange) and the S2 of the interacting-head motif (blue). Four intermolecular interactions (b/b′, c/c′, h) are between : (b/b′) the blocked head RLC NTF (b, tan; b′, gold) and the I loop of the motor domain of the neighbor free head (b, gold, b′, blue); (c/c′) the blocked head ELC18 (c, orange, c′, gold) and the C loop of the neighboring free head (c, gold, c′, blue); (h) the SH3 of the blocked head motor domain18 (green) with the S2 of the neighbor interacting-head (pale blue backbone surface). An interaction between the blocked head ELC (orange) and the backbone is not shown. The 3D-map is shown as a pale blue (backbone S2) or gold surface (up and low interacting-head pairs).