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1: Nucleic Acids Res. 2009 Jan;37(Database issue):D16-8. Epub 2008 Oct 16.Click here to read Click here to read Links

DDBJ dealing with mass data produced by the second generation sequencer.

Sugawara H, Ikeo K, Fukuchi S, Gojobori T, Tateno Y.

Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems, Yata, Mishima 411-8540, Japan.

DNA Data Bank of Japan (DDBJ) (http://www.ddbj.nig.ac.jp) collected and released 2 368 110 entries or 1 415 106 598 bases in the period from July 2007 to June 2008. The releases in this period include genome scale data of Bombyx mori, Oryzas latipes, Drosophila and Lotus japonicus. In addition, from this year we collected and released trace archive data in collaboration with National Center for Biotechnology Information (NCBI). The first release contains those of O. latipes and bacterial meta genomes in human gut. To cope with the current progress of sequencing technology, we also accepted and released more than 100 million of short reads of parasitic protozoa and their hosts that were produced by using a Solexa sequencer.

PMID: 18927114 [PubMed - indexed for MEDLINE]

PMCID: PMC2686496