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Nucleic Acids Res. 2009 Jan;37(Database issue):D49-53. doi: 10.1093/nar/gkn694. Epub 2008 Oct 8.

MachiBase: a Drosophila melanogaster 5'-end mRNA transcription database.

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  • 1Department of Computational Biology, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa 277-0882, Japan.

Abstract

MachiBase (http://machibase.gi.k.u-tokyo.ac.jp/) provides a comprehensive and freely accessible resource regarding Drosophila melanogaster 5'-end mRNA transcription at different developmental states, supporting studies on the variabilities of promoter transcriptional activities and gene-expression profiles in the fruitfly. The data were generated in conjunction with the recently developed high-throughput genome sequencer Illumina/Solexa using a newly developed 5'-end mRNA collection method.

PMID:
18842623
[PubMed - indexed for MEDLINE]
PMCID:
PMC2686457
Free PMC Article

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