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    Bioinformatics. 2008 Nov 15;24(22):2634-5. Epub 2008 Sep 23.

    DOCKGROUND protein-protein docking decoy set.

    Liu S, Gao Y, Vakser IA.

    Center for Bioinformatics, The University of Kansas, 2030 Becker Drive, Lawrence, KS 66047, USA.

    A protein-protein docking decoy set is built for the Dockground unbound benchmark set. The GRAMM-X docking scan was used to generate 100 non-native and at least one near-native match per complex for 61 complexes. The set is a publicly available resource for the development of scoring functions and knowledge-based potentials for protein docking methodologies. AVAILABILITY: The decoys are freely available for download at http://dockground.bioinformatics.ku.edu/UNBOUND/decoy/decoy.php

    PMID: 18812365 [PubMed - indexed for MEDLINE]

    PMCID: 2579708

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