Membrane-targeted Inp54p molecules cause distinct changes in raft and nonraft PIP2. A, targeting of the PIP2-specific phosphatase Inp54p to raft and nonraft membrane fractions. The constructs contained either the first 10 amino acids of Lck (L10) or the first 15 amino acids of c-Src (S15) for membrane association, followed by GFP and finally the soluble domain of Inp54p (L10-Inp54p and S15-Inp54p, respectively). L10 targets proteins to the detergent-resistant raft fraction, and S15 restricts proteins to the detergent-soluble nonraft fraction (21). Myr and Palm indicate sites of myristoylation and palmitoylation, respectively, of the indicated residues in the membrane-anchoring signals. A third construct consisting of membrane-anchored GFP (L10-GFP) was used as a control. B, measurement of changes in membrane PIP2 pools by L10-Inp54p and S15-Inp54p (upper panel). 293T cells expressing either L10-Inp54p or S15-Inp54p were lysed with Triton X-100, and the raft and nonraft membrane fractions were separated by sucrose gradient equilibrium centrifugation. Following separation, the gradient fractions containing the respective membrane fractions were pooled and extracted, and PIP2 was measured in each by immunoblotting. PIP3, PIP2, and phosphatidylinositol 4-phosphate (PI4P) represent purified lipids that were measured in parallel as controls for antibody specificity. Immunoblotting a range of the PIP2 standards together with a set of samples from cells that expressed S15-Inp54p showed that PIP2 extracted from cells was within the dynamic range of the measure (lower panel). In the accompanying plot, values for the S15-Inp54p raft and nonraft fractions are represented by open circles. A.U. denotes arbitrary units. C, quantitation of the immunoblot in B. D, measurement of membrane PIP2 pools for cells expressing L10-GFP and S15-GFP as a control for any sequestering of PIP2 by the S15 sequence. Quantitation of the dots is shown in the graph below. E, average of measurements from three separate trials. These results are represented as the fraction of total PIP2 that was raft-associated. F, total lipids measured for PIP2.In E and F, the error bars represent S.E. *, p ≤ 0.05 by Student's t test; NS (not significant), p > 0.38.