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1: Genome Biol. 2008;9(7):R118. Epub 2008 Jul 24.Click here to read Click here to read Links

MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis.

Chu VT, Gottardo R, Raftery AE, Bumgarner RE, Yeung KY.

Department of Microbiology, University of Washington, Seattle, WA 98195, USA. vudu@u.washington.edu

We present MeV+R, an integration of the JAVA MultiExperiment Viewer program with Bioconductor packages. This integration of MultiExperiment Viewer and R is easily extensible to other R packages and provides users with point and click access to traditionally command line driven tools written in R. We demonstrate the ability to use MultiExperiment Viewer as a graphical user interface for Bioconductor applications in microarray data analysis by incorporating three Bioconductor packages, RAMA, BRIDGE and iterativeBMA.

PMID: 18652698 [PubMed - indexed for MEDLINE]

PMCID: PMC2530872