Brain viral loads and histopathology of MMP9−/− mice infected with WNV. Wild-type and MMP9−/− mice were infected with 500 PFU of WNV for 5 and 7 days, euthanized, and perfused. (A) RNA was extracted from brains, and quantitative RT-PCR was performed to measure the transcripts of WNV E at days 5 and 7. *, P value of <0.04 by Mann-Whitney test. Horizontal lines, means of results. (C to E) The transcripts of TNF-α (C), alpha interferon (D), and IL-6 (E) in the brain at day 7 were measured by quantitative RT-PCR. Bars indicate the means ± standard errors of pooled results from two experiments (n = 10/group). *, P value of <0.04 by Mann-Whitney test. (B, F, and G) Results of immunofluorescence staining of WNV E (B), staining of CD45 by IHC (F), and H&E staining of cerebral cortex sections (G). Open triangle, neurons with condensed and aggregated nuclear chromatin; arrow, healthy neuron; closed triangle, infiltrating leukocytes; star, microglial nodules formed by clusters of microglial/infiltrating cells around necrotic brain tissues. All images were acquired by using a Zeiss AxioCam fluorescence microscope at a magnification of ×100. Shown are representative cerebral cortex sections from 10 mice/group. WT, wild type.