Electrophoretic mobility comparisons between proteins imported into Arabidopsis chloroplasts in vitro and endogenous AtOEP80. A, Radiolabeled long (AtOEP80 [AUG1]; 732 residues) and short (AtOEP80 [AUG2]; 680 residues) forms of the AtOEP80 protein were generated by in vitro translation using different cDNA templates. These were incubated with Arabidopsis chloroplasts under import conditions and then the chloroplasts were recovered. In vitro translation products equivalent to 10% of the amount added to each import assay (IVT+/Chl−), Arabidopsis chloroplasts containing imported, radiolabeled proteins (IVT+/Chl+), and equivalent chloroplast samples lacking imported, radiolabeled protein (IVT−/Chl+) were resolved side-by-side using SDS-PAGE, blotted onto the same membrane, and then analyzed either by probing with AtOEP80 and psToc75 antisera (Immunoblot) or by autoradiography (Autorad). The positions of endogenous AtOEP80 and atToc75-III proteins are indicated at right (‘80’ and ‘75’, respectively). Positions of molecular mass standards are indicated at left (sizes in kD). Under the conditions used, the endogenous AtOEP80 protein migrated slower than atToc75-III, whereas both proteins ran faster than the 75-kD marker protein. B, In vitro translated, radiolabeled AtOEP80 (AtOEP80 [AUG2]; 680 residues) was incubated with Arabidopsis chloroplasts under import conditions. One-half of the recovered chloroplast sample was subjected to alkaline extraction using 0.1 m Na2CO3 and separated into soluble and membrane fractions as described (Inoue and Potter, 2004). In vitro translation products equivalent to 5% of the amount used for the import assay (IVT), unfractionated Arabidopsis chloroplasts containing imported, radiolabeled protein (Imp), and the supernatant (Sup) and membrane (Mem) fractions obtained after alkaline extraction were resolved side-by-side using SDS-PAGE, blotted onto the same membrane, and then analyzed either by probing with AtOEP80 antiserum (Immunoblot) or by autoradiography (Autorad). The position of imported AtOEP80 is indicated at right. Positions of molecular mass standards are indicated at left (sizes in kD); note that the 75-kD marker runs significantly slower than atToc75-III on a 7.5% SDS-PAGE gel.