The PDZ domain protein harmonin interacts with the cytoplasmic domain of CDH23-68 and CDH23+68 and with F-actin. The CDH23-68 isoform binds to the PDZ1 and PDZ2 domain of harmonin via an internal and C-terminal binding motif within the CDH23 cytoplasmic domain (blue rectangles), respectively. The internal binding motif is disrupted in CDH23+68 by amino acids that are encoded by alternatively spliced exon 68. A harmonin fragment encompassing the two coiled coil (CC) domains, the proline-serine-threonine (PST) domain, and PDZ3 contains the F-actin binding domain. CDH23-68 and CDH23+68 can also be co-immunoprecipitated with Myo1c, but it has not been shown that the proteins bind directly to each other or are linked by other molecules.