Stud Health Technol Inform. 2008;138:135-46.

A protein structure prediction service in the ProGenGrid system.

Mirto M, Ferramosca A, Tartarini D, Romano S, Negro A, Tasco G, Fiore S, Zara V, Casadio R, Aloisio G.

Source

SPACI Consortium, University of Salento, Lecce & NNL/CNR-INFM, Lecce, Italy. maria.mirto@unile.it

Abstract

This paper describes a protein tertiary structure prediction service implemented in a Grid Environment. The service has been used for predicting the dicarboxylate carrier (DIC) of Saccharomyces cerevisiae by using the homology modelling approach. The visualization of the predicted model is made possible by using an interactive virtual reality environment based on X3D and Ajax3d technologies.

PMID:: 18560115; [PubMed - indexed for MEDLINE]

Publication Types, MeSH Terms, Substances

Publication Types

Research Support, Non-U.S. Gov't

MeSH Terms

Substances

Dicarboxylic Acid Transporters

LinkOut - more resources

Full Text Sources

Other Literature Sources

Labome Researcher Resource - ExactAntigen/Labome

Molecular Biology Databases

Saccharomyces Genome Database

Supplemental Content

Save items

Related citations in PubMed

A services oriented system for bioinformatics applications on the grid. [Stud Health Technol Inform. 2007]
A services oriented system for bioinformatics applications on the grid.
Aloisio G, Cafaro M, Epicoco I, Fiore S, Mirto M. Stud Health Technol Inform. 2007; 126:174-83.
ProGenGrid: a grid-enabled platform for bioinformatics. [Stud Health Technol Inform. 2005]
ProGenGrid: a grid-enabled platform for bioinformatics.
Aloisio G, Cafaro M, Fiore S, Mirto M. Stud Health Technol Inform. 2005; 112:113-26.
Protein structure prediction based on sequence similarity. [Methods Mol Biol. 2009]
Protein structure prediction based on sequence similarity.
Jaroszewski L. Methods Mol Biol. 2009; 569:129-56.
Review Homology modelling: a review about the method on hand of the diabetic antigen GAD 65 structure prediction. [Wien Med Wochenschr. 2009]
Review Homology modelling: a review about the method on hand of the diabetic antigen GAD 65 structure prediction.
Wiltgen M, Tilz GP. Wien Med Wochenschr. 2009; 159(5-6):112-25.
Review [Computational chemistry and bioinformatics: grid computing for protein simulation]. [Tanpakushitsu Kakusan Koso. 2004]
Review [Computational chemistry and bioinformatics: grid computing for protein simulation].
Aoyagi M, Ka K. Tanpakushitsu Kakusan Koso. 2004 Mar; 49(4):573-8.

See reviews... See all...

Recent activity

Clear Turn Off Turn On

A protein structure prediction service in the ProGenGrid system.
A protein structure prediction service in the ProGenGrid system.
Stud Health Technol Inform. 2008 ;138:135-46.

PubMed
A data model for integrating heterogeneous medical data in the Health-e-Child pr...
A data model for integrating heterogeneous medical data in the Health-e-Child project.
Stud Health Technol Inform. 2008 ;138:13-23.

PubMed
Effect of lead on cardiac parasympathetic function.
Effect of lead on cardiac parasympathetic function.
Int Arch Occup Environ Health. 1991 ;62(8):549-53.

PubMed
Populomics.
Populomics.
Stud Health Technol Inform. 2008 ;137:265-8.

PubMed
Association of cholesteryl ester transfer protein genotypes with CETP mass and a...
Association of cholesteryl ester transfer protein genotypes with CETP mass and activity, lipid levels, and coronary risk.
JAMA. 2008 Jun 18 ;299(23):2777-88.

PubMed

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

PubMed

Result Filters

Display Settings:

Send to: