Display Settings:

Format

Send to:

Choose Destination
    Biopolymers. 2008 Nov;89(11):916-20.

    Hot-spot residues at the E9/Im9 interface help binding via different mechanisms.

    Source

    Department of Chemistry and Biochemistry, University of California at San Diego, LA Jolla, CA 92093-0365, USA. swong@mccammon.ucsd.edu

    Abstract

    Protein-protein association involves many interface interactions, but they do not contribute equally. Ala scanning experiments reveal that only a few mutations significantly lower binding affinity. These key residues, which appear to drive protein-protein association, are called hot-spot residues. Molecular dynamics simulations of the Colicin E9/Im9 complex show Im9 Glu41 and Im9 Ser50, both hot-spots, bind via different mechanisms. The results suggest that Im9 Ser50 restricts Glu41 in a conformation auspicious for salt-bridge formation across the interface. This type of model may be helpful in engineering hot-spot clusters at protein-protein interfaces and, consequently, the design of specificity.

    PMID:
    18546205
    [PubMed - indexed for MEDLINE]
    PMCID:
    PMC2575057
    Free PMC Article

    Images from this publication.See all images (5) Free text

    Figure 1
    Figure 3
    Figure 5
    Figure 2
    Figure 4

      Supplemental Content

      Icon for John Wiley & Sons, Inc. Icon for PubMed Central

      Save items

      loading

      Recent activity

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...
      Write to the Help Desk