Many macroscopic imaging technologies (shown above the timeline) are in routine clinical use, and there have been huge advances in their capabilities to obtain anatomical and physiological information since the beginning of the twentieth century. Shown are some examples of bones (X-rays), soft tissue (ultrasound, MRI and CT rows), three-dimensional organs (CT and MRI rows) and physiological imaging (MRI and PET rows). Microscopic and other intravital optical techniques (shown below the timeline) have developed over the past decade and now allow studies of genetic, molecular and cellular events in vivo. Shown are surface-weighted, whole-mouse, two-dimensional techniques (macroscopic reflectance row); tomographic three-dimensional techniques, often in combination with other anatomical modalities (tomography row); and intravital microscopy techniques (microscopy row). The timeline is approximate and is not to scale. BLI, bioluminescence imaging; CT, computed tomography; DOT, diffuse optical tomography; FMT, fluorescence-mediated tomography; FPT, fluorescence protein tomography; FRI, fluorescence reflectance imaging; HR-FRI, high-resolution FRI; LN-MRI, lymphotropic nanoparticle-enhanced MRI; MPM, multiphoton microscopy; MRI, magnetic resonance imaging; MSCT, multislice CT; OCT, optical coherence tomography; OFDI, optical frequency-domain imaging; PET, positron-emission tomography. (PET image reproduced, with permission, from ref. 4. Diffusion MRI image courtesy of B. Ross and A. Rehemtulla, Univ. Michigan Medical School, Ann Arbor. X-ray image (left) reproduced, with permission, from ref. 86. Diaphanoscopy image reproduced, with permission, from ref. 87. Fibre-optic image reproduced, with permission, from ref. 88. BLI image courtesy of K. Shah, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts. Lifetime FRI image courtesy of U. Mahmood and C. Salthouse, Massachusetts General Hospital. DOT image reproduced, with permission, from ref. 89. FPT image courtesy of G. Zacharakis and V. Ntziachristos, Massachusetts General Hospital. FMT-MRI image courtesy of J. Chen, Massachusetts General Hospital. Bright-field image (left) reproduced, with permission, from ref. 14. Bright-field image (right) courtesy of T. Mempel, Massachusetts General Hospital. Epifluorescence image courtesy of F. Jaffer, Massachusetts General Hospital. OCT, OFDI image reproduced, with permission, from ref. 22. MPM image reproduced, with permission, from ref. 51. Microendoscopy image reproduced, with permission, from ref. 17.)