Nucleic Acids Res. 2008 Jan;36(Database issue):D517-8. Epub 2007 Dec 20.

AlterORF: a database of alternate open reading frames.

Pedroso I, Rivera G, Lazo F, Chacón M, Ossandón F, Veloso FA, Holmes DS.

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Center for Bioinformatics and Genome Biology, Life Science Foundation, MIFAB and Andrés Bello University, Santiago, Chile and Department of Informatics, University of Santiago, Santiago, Chile.

Abstract

AlterORF is a searchable database that contains information regarding alternate open reading frames (ORFs) for over 1.5 million genes in 481 prokaryotic genomes. The objective of the database is to provide a platform for improving genome annotation and to serve as an aid for the identification of prokaryotic genes that potentially encode proteins in more than one reading frame. The AlterORF Database can be accessed through a web interface at www.alterorf.cl.

PMID:: 18096612; [PubMed - indexed for MEDLINE]
PMCID: PMC2238990

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