Gene microarray analysis of Th17 cells and their predominant expression of CCR6. (A) LN CD4+ T cells from 10-mo-old BALB/c or SKG mice were stained for intracellular IL-17 and IFN-γ, or these cytokines and cell-surface FR4. (B) CD4+ T cells from IFN-γ−/− or IL-6−/− mice were transferred to RAG2−/− mice or IL-6−/−RAG2−/− mice, respectively. Intracellular IL-17 and IFN-γ in recipient splenic CD4+ T cells were stained on day 7. (C) Purified FR4−CD4+ T cells from BALB/c or SKG mice or CD4+ T cells after homeostatic proliferation, as shown in A and B, were stimulated with PMA/ionomycin for 3 h, and the amounts of IL-17 in culture supernatants were measured by ELISA. (D and E) Total RNA extracted from activated cells, as shown in C, was subjected to gene microarray for SKG versus BALB/c FR4−CD4+ T cells or IFN-γ−/− versus IL-6−/−CD4+ T cells after homeostatic proliferation. The expression of each gene was averaged from three independent experiments and analyzed by GeneSpring software. The Venn diagram shown in D represents a group of up-regulated genes in SKG FR4−CD4+ T cells and IFN-γ−/−CD4+ T cells after homeostatic proliferation. Genes for cytokines, chemokines, or their receptors commonly up-regulated in the two groups of genes are shown in E. Graded colors represent relative expression levels. (F) LN CD4+ T cells from 2- or 10-mo-old SKG mice were stained for CCR6 and intracellular IL-17 or IFN-γ. (G) CD4+ T cells from IFN-γ−/−, IL-6−/−, or WT mice were stained for CCR6 and intracellular IL-17 or IFN-γ after homeostatic proliferation, as shown in B. (H) Total RNA extracted from purified SKG CCR6+ or CCR6−CD4+ T cells stimulated with PMA/ionomycin for 3 h was subjected to quantitative RT-PCR for the indicated genes and normalized for hypoxanthine-guanine phosphoribosyltransferase (HPRT) messenger RNA expression, as previously described (reference 7). Data are shown as the mean ± SD of three independent experiments. Results in A–C, F, and G represent three to five independent experiments. The percentage of cells in each quadrant is shown in A, B, F, and G.