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Bioinformatics. 2008 Jan 1;24(1):143-5. Epub 2007 Nov 14.

MetaNetter: inference and visualization of high-resolution metabolomic networks.

Author information

  • 1UMR1089 Xénobiotiques INRA-ENVT, 180 chemin de Tournefeuille, St-Martin-du-Touch, BP3 31931 Toulouse, France. Fabien.Jourdan@toulouse.inra.fr

Abstract

SUMMARY:

We present a Cytoscape plugin for the inference and visualization of networks from high-resolution mass spectrometry metabolomic data. The software also provides access to basic topological analysis. This open source, multi-platform software has been successfully used to interpret metabolomic experiments and will enable others using filtered, high mass accuracy mass spectrometric data sets to build and analyse networks.

AVAILABILITY:

http://compbio.dcs.gla.ac.uk/fabien/abinitio/abinitio.html

PMID:
18003642
[PubMed - indexed for MEDLINE]
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