Steady-state and pre-steady-state kinetic analysis of Mycobacterium smegmatis cysteine ligase (MshC)

Biochemistry. 2007 Oct 9;46(40):11421-9. doi: 10.1021/bi7011492. Epub 2007 Sep 12.

Abstract

Mycobacterium tuberculosis and many other members of the Actinomycetes family produce mycothiol, i.e., 1-d-myo-inosityl-2-(N-acetyl-l-cysteinyl)amido-2-deoxy-alpha-d-glucopyranoside (MSH or AcCys-GlcN-Ins), to act against oxidative and antibiotic stress. The biosynthesis of MSH is essential for cell growth and has been proposed to proceed via a biosynthetic pathway involving four key enzymes, MshA-MshD. The MSH biosynthetic enzymes present potential targets for inhibitor design. With this as a long-term goal, we have carried out a kinetic and mechanistic characterization, using steady-state and pre-steady-state approaches, of the recombinant Mycobacterium smegmatis MshC. MshC catalyzes the ATP-dependent condensation of GlcN-Ins and cysteine to form Cys-GlcN-Ins. Initial velocity and inhibition studies show that the steady-state kinetic mechanism of MshC is a Bi Uni Uni Bi Ping Pong mechanism, with ATP binding followed by cysteine binding, release of PPi, binding of GlcN-Ins, followed by the release of Cys-GlcN-Ins and AMP. The steady-state kinetic parameters were determined to be kcat equal to 3.15 s-1, and Km values of 1.8, 0.1, and 0.16 mM for ATP, cysteine, and GlcN-Ins, respectively. A stable bisubstrate analogue, 5'-O-[N-(l-cysteinyl)sulfamonyl]adenosine, exhibits competitive inhibition versus ATP and noncompetitive inhibition versus cysteine, with an inhibition constant of approximately 306 nM versus ATP. Single-turnover reactions of the first and second half reactions were determined using rapid-quench techniques, giving rates of approximately 9.4 and approximately 5.2 s-1, respectively, consistent with the cysteinyl adenylate being a kinetically competent intermediate in the reaction by MshC.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate / chemistry
  • Adenosine Triphosphate / metabolism
  • Catalysis
  • Cysteine / chemistry
  • Cysteine / metabolism*
  • Diphosphates / chemistry
  • Diphosphates / metabolism
  • Glucosamine / chemistry
  • Glucosamine / metabolism
  • Glycopeptides / chemistry
  • Glycopeptides / metabolism
  • Hydrogen-Ion Concentration
  • Inositol / chemistry
  • Inositol / metabolism
  • Kinetics
  • Ligases / chemistry
  • Ligases / genetics
  • Ligases / metabolism*
  • Models, Chemical
  • Molecular Structure
  • Mycobacterium smegmatis / enzymology*

Substances

  • Diphosphates
  • Glycopeptides
  • mycothiol
  • Inositol
  • Adenosine Triphosphate
  • Ligases
  • Cysteine
  • Glucosamine