Nat Biotechnol. 2007 Aug;25(8):887-93.

The minimum information about a proteomics experiment (MIAPE).

Source

The HUPO Proteomics Standards Initiative, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK. chris.taylor@ebi.ac.uk

Abstract

Both the generation and the analysis of proteomics data are now widespread, and high-throughput approaches are commonplace. Protocols continue to increase in complexity as methods and technologies evolve and diversify. To encourage the standardized collection, integration, storage and dissemination of proteomics data, the Human Proteome Organization's Proteomics Standards Initiative develops guidance modules for reporting the use of techniques such as gel electrophoresis and mass spectrometry. This paper describes the processes and principles underpinning the development of these modules; discusses the ramifications for various interest groups such as experimentalists, funders, publishers and the private sector; addresses the issue of overlap with other reporting guidelines; and highlights the criticality of appropriate tools and resources in enabling 'MIAPE-compliant' reporting.

Comment in

Guidelines for reporting the use of gel image informatics in proteomics. [Nat Biotechnol. 2010]
Guidelines for reporting the use of gel image informatics in proteomics.Hoogland C, O'Gorman M, Bogard P, Gibson F, Berth M, Cockell SJ, Ekefjärd A, Forsstrom-Olsson O, Kapferer A, Nilsson M, et al. Nat Biotechnol. 2010 Jul; 28(7):655-6.
Guidelines for reporting the use of gel electrophoresis in proteomics. [Nat Biotechnol. 2008]
Guidelines for reporting the use of gel electrophoresis in proteomics.Gibson F, Anderson L, Babnigg G, Baker M, Berth M, Binz PA, Borthwick A, Cash P, Day BW, Friedman DB, et al. Nat Biotechnol. 2008 Aug; 26(8):863-4.
Guidelines for reporting the use of mass spectrometry informatics in proteomics. [Nat Biotechnol. 2008]
Guidelines for reporting the use of mass spectrometry informatics in proteomics.Binz PA, Barkovich R, Beavis RC, Creasy D, Horn DM, Julian RK Jr, Seymour SL, Taylor CF, Vandenbrouck Y. Nat Biotechnol. 2008 Aug; 26(8):862.
Guidelines for reporting the use of capillary electrophoresis in proteomics. [Nat Biotechnol. 2010]
Guidelines for reporting the use of capillary electrophoresis in proteomics.Domann PJ, Akashi S, Barbas C, Huang L, Lau W, Legido-Quigley C, McClean S, Neusüss C, Perrett D, Quaglia M, et al. Nat Biotechnol. 2010 Jul; 28(7):654-5.
Guidelines for reporting the use of column chromatography in proteomics. [Nat Biotechnol. 2010]
Guidelines for reporting the use of column chromatography in proteomics.Jones AR, Carroll K, Knight D, Maclellan K, Domann PJ, Legido-Quigley C, Huang L, Smallshaw L, Mirzaei H, Shofstahl J, et al. Nat Biotechnol. 2010 Jul; 28(7):654.

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