Phylogenetic tree and PFGE profiles. To the left is a phylogenetic tree (dendrogram) built based on MLST haplotypes concatenated from the integral fragments of seven housekeeping genes, with distances indicating absolute numbers of nucleotide differences distributed proportionally among branches. To the right are PFGE profiles obtained using XbaI digestion. ST, sequence type. Abbreviations for TOP17 strains further identified by clinical setting: AC, acute cystitis; R, rectal; ABU, asymptomatic bacteriuria; RC, recurrent cystitis. Abbreviations for site of isolation: U, urine; S, stool; R, respiratory secretions; B, blood. Abbreviations for place of isolation: WA, Washington (Seattle); IA, Iowa; MN, Minnesota (Minneapolis); SE, Sweden; NY, New York; TO, Tonga.