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J Microbiol Methods. 2007 Jul;70(1):200-4. Epub 2007 Apr 11.

Evaluation of LSU rRNA-gene PCR primers for analysis of arbuscular mycorrhizal fungal communities via terminal restriction fragment length polymorphism analysis.

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  • 1Microbial Ecology Program, Division of Biological Sciences, The University of Montana, Missoula, MT 59812, USA.


The efficacy of the LSU rDNA PCR primers FLR3 and FLR4 for discrimination of arbuscular mycorrhizal fungi communities via T-RFLP analysis was examined. Analysis of both public database and site-specific derived DNA sequences suggesting LSU rDNA-based T-RFLP analysis represents a valuable alternative for analysis of AMF communities.

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