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    Genome Biol. 2007;8(3):R34.

    Hawkeye: an interactive visual analytics tool for genome assemblies.

    Source

    Center for Bioinformatics and Computational Biology, Biomolecular Sciences Building, University of Maryland, College Park, Maryland 20742, USA. mschatz@umiacs.umd.edu

    Abstract

    Genome sequencing remains an inexact science, and genome sequences can contain significant errors if they are not carefully examined. Hawkeye is our new visual analytics tool for genome assemblies, designed to aid in identifying and correcting assembly errors. Users can analyze all levels of an assembly along with summary statistics and assembly metrics, and are guided by a ranking component towards likely mis-assemblies. Hawkeye is freely available and released as part of the open source AMOS project http://amos.sourceforge.net/hawkeye.

    PMID:
    17349036
    [PubMed - indexed for MEDLINE]
    PMCID:
    PMC1868940
    Free PMC Article

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