Cluster analysis of 500 APEC and 500 UPEC strains for 39 ExPEC-associated traits. The leftmost portion of the figure is the dendrogram created from the average linkage cluster analysis on the presence of virulence factors. Just to the right of the dendrogram is column 1, which shows cluster membership based upon the dendrogram: red, cluster 1; cream, cluster 2; purple, cluster 3; orange, cluster 4; yellow, cluster 5; light blue, cluster 6; and green, cluster 7. Column 2 identifies an isolate as a UPEC strain (blue) or an APEC strain (green). Also, APEC O1 is identified in this column with a red bar. Columns 3 to 41 show the virulence genotype of each isolate tested. Each column in this group shows the results for a single gene. Black, gene is present; light green, gene is absent. Labels across the top of columns 3 to 41 show the APEC plasmid-linked genes (yellow) and the ExPEC chromosome-associated virulence genes (sky blue). ompTp, plasmid-encoded ompT; cvaB5, 5′ end of the cvaB gene; cvaB3, 3′ end of the cvaB gene; colM, cma; colB, cbi; papG1, papG allele 1; papG23, papG alleles 2 and 3. This method of analysis was first described by Rodriguez-Siek et al. (50) and has since been used in similar form elsewhere (8).