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Biophys J. 2007 Jan 1;92(1):172-84. Epub 2006 Oct 6.

Dynamics of the nucleotide pocket of myosin measured by spin-labeled nucleotides.

Author information

  • 1Department of Biochemistry and Biophysics, University of California, San Francisco, California 94158, USA. nariman.naber@ucsf.edu

Abstract

We have used electron paramagnetic probes attached to the ribose of ATP (SL-ATP) to monitor conformational changes in the nucleotide pocket of myosin. Spectra for analogs bound to myosin in the absence of actin showed a high degree of immobilization, indicating a closed nucleotide pocket. In the Actin.Myosin.SL-AMPPNP, Actin.Myosin.SL-ADP.BeF(3), and Actin.Myosin.SL-ADP.AlF(4) complexes, which mimic weakly binding states near the beginning of the power stroke, the nucleotide pocket remained closed. The spectra of the strongly bound Actin.Myosin.SL-ADP complex consisted of two components, one similar to the closed pocket and one with increased probe mobility, indicating a more open pocket, The temperature dependence of the spectra showed that the two conformations of the nucleotide pocket were in equilibrium, with the open conformation more favorable at higher temperatures. These results, which show that opening of the pocket occurs only in the strongly bound states, appear reasonable, as this would tend to keep ADP bound until the end of the power stroke. This conclusion also suggests that force is initially generated by a myosin with a closed nucleotide pocket.

PMID:
17028139
[PubMed - indexed for MEDLINE]
PMCID:
PMC1697850
Free PMC Article

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