The proteins were first fully unfolded in 6 M urea buffered with 20 mM Gly-HCl, pH 3. The kinetics of the refolding reactions were studied by diluting the fully unfolded protein at a 1:10 ratio into refolding buffer (50 mM phosphate, pH 7.0 or 50 mM sodium acetate, pH 4.8) containing urea at a desired concentration. In most experiments, the final protein concentration was 40 μM. The reactions were monitored at 5°C by fluorescence above 324 nm (excitation at 288 nm) using the continuous flow capillary mixing method described by Shastry et al. 30 at total flow rates of 0.825 and 1.375 ml/s. The dead time of the capillary mixer was determined by measuring the quenching of N-acetyl tryptophan amide fluorescence by N-bromosuccinimide at several quencher concentrations. Under our present experimental conditions (5°C; final urea concentration of ~ 0.6 M) the measured dead times at 0.825 and 1.375 ml/s total flow rates were 180 and 120 μs, respectively. Each protein refolding reaction was measured at least 5 times. The kinetic data were analyzed according to a three-state sequential model (Scheme I) using the IGOR Pro software (Wavemetrics Inc). We also made the conventional assumption that there is a linear dependence between the logarithm of an elementary rate constant, k
ij, and denaturant concentration: (1)

where k
ij0 and m
ij represent the microscopic rate constant in the absence of denaturant and the urea dependence of the rate constant, respectively.