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Genome Biol. 2005;6(13):R115. Epub 2005 Dec 30.

iVici: Interrelational Visualization and Correlation Interface.

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  • 1Département de Biochimie and Centre Robert-Cedergren, Bioinformatiques et Genomiques, Université de Montréal, CP 6128, Succursale Centre-ville, Montréal, Québec, H3C 3J7, Canada. kirill.tarassov@umontreal.ca

Abstract

We have developed an application, iVici, to analyze cellular networks represented as addressable symmetric or asymmetric two-dimensional matrices. iVici was designed to permit simultaneous visualization and correlation of multiple datasets, representing any relationship between a set of genes, mRNAs, or proteins. Visual overlay of datasets and addressable access to gene annotations permits comparison of networks of different types (for example protein-protein interactions and genetic networks) or investigation of the dynamic reorganization of a particular network.

PMID:
16420674
[PubMed - indexed for MEDLINE]
PMCID:
PMC1414114
Free PMC Article

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