iVici: Interrelational Visualization and Correlati...[Genome Biol. 2005]

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1: Genome Biol. 2005;6(13):R115. Epub 2005 Dec 30. Links

iVici: Interrelational Visualization and Correlation Interface.

Tarassov K, Michnick SW.

Département de Biochimie and Centre Robert-Cedergren, Bioinformatiques et Genomiques, Université de Montréal, CP 6128, Succursale Centre-ville, Montréal, Québec, H3C 3J7, Canada. kirill.tarassov@umontreal.ca

We have developed an application, iVici, to analyze cellular networks represented as addressable symmetric or asymmetric two-dimensional matrices. iVici was designed to permit simultaneous visualization and correlation of multiple datasets, representing any relationship between a set of genes, mRNAs, or proteins. Visual overlay of datasets and addressable access to gene annotations permits comparison of networks of different types (for example protein-protein interactions and genetic networks) or investigation of the dynamic reorganization of a particular network.

PMID: 16420674 [PubMed - indexed for MEDLINE]

PMCID: PMC1414114

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[Curr Opin Struct Biol. 2003]
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[Nat Rev Genet. 2006]
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Cited by 1 PubMed Central article

The apoptotic machinery as a biological complex system: analysis of its omics and evolution, identification of candidate genes for fourteen major types of cancer, and experimental validation in CML and neuroblastoma.
Di Pietro C, Ragusa M, Barbagallo D, Duro LR, Guglielmino MR, Majorana A, Angelica R, Scalia M, Statello L, Salito L, et al. BMC Med Genomics. 2009 Apr 30; 2(1):20. Epub 2009 Apr 30.

[BMC Med Genomics. 2009]

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