Mamm Genome. 2005 Nov;16(11):827-8. Epub 2005 Nov 11.

HCOP: the HGNC comparison of orthology predictions search tool.

Wright MW, Eyre TA, Lush MJ, Povey S, Bruford EA.

Source

HUGO Gene Nomenclature Committee, The Galton Laboratory, Department of Biology, University College London, Wolfson House, 4, Stephenson Way, London, UK. nome@galton.ucl.ac.uk

Abstract

The HGNC Comparison of Orthology Predictions search tool, HCOP (http://www.gene.ucl.ac.uk/cgi-bin/nomenclature/hcop.pl ), enables users to compare predicted human and mouse orthologs for a specified gene, or set of genes, from either species according to the ortholog assertions from the Ensembl, HGNC, Homologene, Inparanoid, MGI and PhIGs databases. Users can assess the reliability of the prediction from the number of these different sources that identify a particular orthologous pair. HCOP provides a useful one-stop resource to summarise, compare and access various sources of human and mouse orthology data.

PMID:: 16284797; [PubMed - indexed for MEDLINE]

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HCOP: a searchable database of human orthology predictions. [Brief Bioinform. 2007]
HCOP: a searchable database of human orthology predictions.
Eyre TA, Wright MW, Lush MJ, Bruford EA. Brief Bioinform. 2007 Jan; 8(1):2-5. Epub 2006 Sep 2.
The HGNC Database in 2008: a resource for the human genome. [Nucleic Acids Res. 2008]
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Review The quest for orthologs: finding the corresponding gene across genomes.
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Cited by 4 PubMed Central articles

An integrative approach to ortholog prediction for disease-focused and other functional studies. [BMC Bioinformatics. 2011]
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