The effects of the K56E/K58E double mutation on lipid binding by HIP1. (A) A sequence alignment of the putative α1-to-α2 loop region of HIP1 with that of other ANTH domain proteins based on the crystal structure of the CALM (Altschul et al., 1997; Ford et al., 2001). Note key lipid binding residues (red); sequence identity (red); mutated residues (red arrowheads); and predicted NLS using http://cubic.bioc.columbia.edu/cgi/var/nair/resonline.pl (blue amino acids). Sequence identifications: HsHIP1 (NP_005329), HsHIP1R (NP_003950), Sp putative clathrin coat assembly protein (NP_596345), ScSla2p (NP_014156), Xl Hip1-prov protein (AAH77182), and RnAP180 (CAA48748). Hs, Homo sapiens; Sc, Saccharomyces cerevisiae; Sp, Schizosaccharomyces pombe; Xl, Xenopus laevis; Rn, Rattus norvegicus. An I/LWEQ module sequence alignment prepared using CLUSTALW incorporating the predicted fourth α helix of the module is shown (McCann and Craig, 1999). Additional sequence identifiers: HsTalin1 (AAF27330) and SpSla2p (NP_594069). (B) Coomassie-stained gel of a sedimentation assay with phosphatidylinositol (PI) and brain (Folch) liposomes. P, pellet; S, supernatant. Liposomes were incubated with 5 μM of the indicated proteins: GST, GST-HIP1N (aa 1–310), GST-HIP1N K/E (aa 1–310 K56E/K58E). (C) Isolation of an enriched clathrin-coated vesicle fraction from LNCaP cells. LNCaP cells were transfected with pcDNA3 HIP1 R1005E or HIP1 K56E/K58E or vector alone. 48 h posttransfection they were disrupted by homogenization and CCV fractions were isolated using a protocol adapted from Hirst et al. (2004). Coomassie blue–stained gel (left) and Western blots of equal protein loadings of homogenate (H), high speed supernatant (HSS), and CCV fractions from the isolation procedure.