CLUSTAL V: improved software for multiple sequence...[Comput Appl Biosci. 1992]

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1: Comput Appl Biosci. 1992 Apr;8(2):189-91.Links

CLUSTAL V: improved software for multiple sequence alignment.

Higgins DG, Bleasby AJ, Fuchs R.

European Molecular Biology Laboratory, Heidelberg, FRG.

The CLUSTAL package of multiple sequence alignment programs has been completely rewritten and many new features added. The new software is a single program called CLUSTAL V, which is written in C and can be used on any machine with a standard C compiler. The main new features are the ability to store and reuse old alignments and the ability to calculate phylogenetic trees after alignment. The program is simple to use, completely menu driven and on-line help is provided.

PMID: 1591615 [PubMed - indexed for MEDLINE]

Using CLUSTAL for multiple sequence alignments. [Methods Enzymol. 1996]
Multiple sequence alignment with the Clustal series of programs. [Nucleic Acids Res. 2003]
CLOURE: Clustal Output Reformatter, a program for reformatting ClustalX/ClustalW outputs for SNP analysis and molecular systematics. [Nucleic Acids Res. 2003]
MULTICLUSTAL: a systematic method for surveying Clustal W alignment parameters. [Bioinformatics. 1999]
The performance of several multiple-sequence alignment programs in relation to secondary-structure features for an rRNA sequence. [Mol Biol Evol. 2000]
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CLUSTAL V: improved software for multiple sequence alignment.

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