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    Nucleic Acids Res. 2005 May 24;33(9):2901-7. Print 2005.

    Highly prevalent putative quadruplex sequence motifs in human DNA.

    Source

    CRUK Biomolecular Structure Group, The School of Pharmacy, University of London 29-39 Brunswick Square, London WC1N 1AX, UK.

    Abstract

    We report here the results of a systematic search for the existence and prevalence of potential intramolecular G-quadruplex forming sequences in the human genome. We have also examined the tendency for particular sequences of 'loop' regions to occur in particular positions with respect to the G-tracts in a quadruplex. Using arithmetic ratio and probability techniques we have discovered frequent and systematic occurrence of certain sequence types, the most prominent being a potential quadruplex containing CCTGT in the first 'loop' position. Being able to highlight types of potential quadruplex sequences in G-rich regions is an important step in searching for biologically relevant sequences and finding their function.

    PMID:
    15914666
    [PubMed - indexed for MEDLINE]
    PMCID:
    PMC1140077
    Free PMC Article

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