Typical single molecule polarized fluorescence data. Measurements were made from a single HMM(104-BR-115) molecule bound to an actin filament in the presence of apyrase as described in Materials and Methods. Alternation of excitation pathways (
1 and
2) and excitation polarization (
s and
p) with simultaneous collection with two detector polarizations (
x and
y) produces eight measurements every 40 ms. The numbers of photons detected by the APDs in each 10 ms interval are plotted as eight polarized fluorescence intensities. The weighted sum (
ITot (24)) of these intensities is plotted in black. The eight intensities are then fit to determine the orientation,
β (
red),
α (
green), slow wobble,
δ (
blue), and
IFit (
blue), a value proportional to the total intensity (minus background). The average angles for the molecule shown here are
β = 82°,
α = 35°, and
δ = 20°. The average

The intensity levels and angles are constant as expected for actomyosin in the absence of ATP. A high
β value is common for the highly polarized probe (104-BR-115).