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Bioinformatics. 2005 May 1;21(9):2104-5. Epub 2005 Jan 12.

ProtTest: selection of best-fit models of protein evolution.

Author information

  • 1Department of Biochemistry, Genetics and Immunology, Universidad de Vigo, Spain. fabascal@uvigo.es

Abstract

SUMMARY:

Using an appropriate model of amino acid replacement is very important for the study of protein evolution and phylogenetic inference. We have built a tool for the selection of the best-fit model of evolution, among a set of candidate models, for a given protein sequence alignment.

AVAILABILITY:

ProtTest is available under the GNU license from http://darwin.uvigo.es

PMID:
15647292
[PubMed - indexed for MEDLINE]
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