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Bioinformatics. 2005 Mar 1;21(5):676-9. Epub 2004 Oct 27.

HyPhy: hypothesis testing using phylogenies.

Author information

  • 1Antiviral Research Center, University of California San Diego San Diego, CA 92103, USA.

Abstract

The HyPhypackage is designed to provide a flexible and unified platform for carrying out likelihood-based analyses on multiple alignments of molecular sequence data, with the emphasis on studies of rates and patterns of sequence evolution.

AVAILABILITY:

http://www.hyphy.org

CONTACT:

muse@stat.ncsu.edu

SUPPLEMENTARY INFORMATION:

HyPhydocumentation and tutorials are available at http://www.hyphy.org.

PMID:
15509596
[PubMed - indexed for MEDLINE]
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