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    World J Gastroenterol. 2004 Nov 1;10(21):3127-31.

    An integrated approach to the detection of colorectal cancer utilizing proteomics and bioinformatics.

    Yu JK, Chen YD, Zheng S.

    Cancer Institute, Zhejiang University, Hangzhou 310009, Zhejiang Province, China.

    AIM: To find new potential biomarkers and to establish patterns for early detection of colorectal cancer. METHODS: One hundred and eighty-two serum samples including 55 from colorectal cancer (CRC) patients, 35 from colorectal adenoma (CRA) patients and 92 from healthy persons (HP) were detected by surface-enhanced laser desorption/ionization mass spectrometry (SELDI-MS). The data of spectra were analyzed by bioinformatics tools like artificial neural network (ANN) and support vector machine (SVM). RESULTS: The diagnostic pattern combined with 7 potential biomarkers could differentiate CRC patients from CRA patients with a specificity of 83%, sensitivity of 89% and positive predictive value of 89%. The diagnostic pattern combined with 4 potential biomarkers could differentiate CRC patients from HP with a specificity of 92%, sensitivity of 89% and positive predictive value of 86%. CONCLUSION: The combination of SELDI with bioinformatics tools could help find new biomarkers and establish patterns with high sensitivity and specificity for the detection of CRC.

    PMID: 15457557 [PubMed - indexed for MEDLINE]

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